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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921139.1_cds_XP_016470154.1_62633
CDS Infomation

[gene=LOC107792457] [db_xref=GeneID:107792457] [protein=probable protein phosphatase 2C 60 isoform X1] [protein_id=XP_016470154.1] [location=complement(join(6886..7143,7225..7279,7737..7789,8018..8094,8193..8316,8486..8611,12818..12968,13508..13616,15923..15986,16244..16360))] [gbkey=CDS]
Sequence

ATGGGAATATATTTAAGCAGTCCGAAAACTGAAAAAGTGTCCGAGGATGGTGAGAATGAC
AGACTAAGATATGGCTTGTCATCAATGCAGGGATGGCGTTCAACCATGGAAGATGCTCAT
GCAGTTTATCCACATTTGGACACTTCCACTTCCTTCTTTGGTGTATATGATGGCCATGGA
GGCGATGAAGTTTCTAAATTTTGTGCCAAGTTTCTTCACCGAGAGGTTCTTAATCATGAA
GCATTCTCAGTTGGGGATGTAGGCACTTCTATGCAGCATGCTTTTCTCAGAATGGACGAG
ATGATGCGTGGACAAACAGGTCAGAGAGAATTAGCCTCTTTGGCGGAAAAGGACCAAGCT
AAGGAGATAATAGAGGGTTTGATATCGCCTCGCAAGAGTGGTGAATTCAAGGGGCAAATG
GATTGTGCGTCTTCAGATAAGGGGGCTAACTCTGATTACCATGGGCCAACTGCAGGAAGC
ACAGCATGTGTAGCAATCATTCAAAATACTCAACTTCTTGTGGCAAATGCTGGCGATTCT
CGCTGTGTCTTATCACGGAAGGGTCAGGCATATGATATGTCTAGGGACCATAAGCCTGAC
CTTGAAGCTGAAAAGCAAAGGATTAGTAATGCTGGTGGATACGTCCGGTGTGGACGGGTT
AATGGAAGTTTAAACATGGCAAGAGCAATTGGCGACATGGAACTCAAACAGAACAAATCA
TTGCCTGCTGAAAAACAAATAGTGACTGCTAATCCTGATATCCGCTCTGTTGAGCTCTGC
AATGATGATGATTTCCTTGTTCTAGCTTGTGATGGCATATGGGATTGCATGTCAAGCCAA
GAAGTTGTGGACTTTGTTGGGGAACAGTTAAAACATGAAAATAAGCTCTCCGTTGTCTGT
GAGCGAGTGCTAGATAGATGTTTGGCGCCAGCCACAGGTGGAGAAGGATGTGATAACATG
ACCATGATCTTGGTACAACTCAAGAAACCCTTCAAGACCGTTGCATTGAACAAGGAGCAA
CTACTGCCTTCTAATCAAAATTCTGAATGTAACGAAAACACAGTAGCATCTAACAATCCT
AATGCTGTACCTACAGGATCTCAATGTAATGATAATGCAGCTGAAAAAGCTTGA

Peptide Sequence

PEP ID

XP_016470154.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 60 isoform X1 [Nicotiana tabacum]
Sequence

MGIYLSSPKTEKVSEDGENDRLRYGLSSMQGWRSTMEDAHAVYPHLDTSTSFFGVYDGHG
GDEVSKFCAKFLHREVLNHEAFSVGDVGTSMQHAFLRMDEMMRGQTGQRELASLAEKDQA
KEIIEGLISPRKSGEFKGQMDCASSDKGANSDYHGPTAGSTACVAIIQNTQLLVANAGDS
RCVLSRKGQAYDMSRDHKPDLEAEKQRISNAGGYVRCGRVNGSLNMARAIGDMELKQNKS
LPAEKQIVTANPDIRSVELCNDDDFLVLACDGIWDCMSSQEVVDFVGEQLKHENKLSVVC
ERVLDRCLAPATGGEGCDNMTMILVQLKKPFKTVALNKEQLLPSNQNSECNENTVASNNP
NAVPTGSQCNDNAAEKA

Transcript Sequence

Gene sequence data has not been registered.